Publications

Preprints/Submitted

  • Chirag Gupta, Jielin Xu, Ting Jin, Saniya Khullar, Xiaoyu Liu, Sayali Alatkar, Feixiong Cheng, Daifeng Wang, Single-cell network biology characterizes cell-type gene regulation for drug repurposing and phenotype prediction in Alzheimer’s disease, in revision, Biorxiv
  • Shuang Liu*, Hyejung Won*, Declan Clarke*, Nana Matoba, Saniya Khullar, Yudi Mu, Daifeng Wang#, Mark Gerstein#, Illuminating links between cis-regulators and trans-acting variants in the human prefrontal cortex, in revision, Biorxiv
  • Saniya Khullar, Daifeng Wang, Predicting gene regulatory networks from multi-omics to link genetic risk variants and neuroimmunology to Alzheimer’s disease phenotypes, under review, Biorxiv
  • Jillian R. Haney, Brie Wamsley, George T. Chen, Sepideh Parhami, Prashant S. Emani, Nathan Chang, Gil D. Hoftman, Diego de Alba, Gaurav Kale, Gokul Ramaswami, Christopher L. Hartl, Ting Jin, Daifeng Wang, Jing Ou, Ye Emily Wu, Neelroop N. Parikshak, Vivek Swarup, T. Grant Belgard, Mark Gerstein, Bogdan Pasaniuc, Michael J. Gandal, Daniel H. Geschwind, Broad transcriptomic dysregulation across the cerebral cortex in ASD, revision under review, Biorxiv

Papers

(Bold: lab members; *co-first-author, equal contribution; # co-corresponding author)

2022

2021

2020

2019

2018

2017

2016

Before 2016

Book reviews and chapters